Viral resistance and HIV treatment
Evolutionary Dynamics of Complex Networks of HIV Drug-Resistant Strains: The Case of San Francisco.
Smith R, Okano J, Kahn J, Bodine E, Blower S. Science. 2010. Jan. [Epub ahead of print]
Over the past two decades, HIV resistance to antiretrovirals has risen to high levels in the wealthier countries of the world able to afford widespread treatment. The authors have gained insights into the evolution and transmission dynamics of ARV resistance by designing a biologically complex multistrain network model. Using this model, they traced the evolutionary history of antiretroviral resistance in San Francisco and predict the future dynamics. Using classification and regression trees, Smith and colleagues have identified the key immunologic, virologic, and treatment factors that increase antiretroviral resistance. Their modelling shows that 60% of the currently circulating antiretroviral-resistant strains in San Francisco are capable of causing self-sustaining epidemics, as each individual infected with one of these strains can cause on average more than one new resistant infection. It is possible that a new wave of antiretroviral-resistant strains that pose a significant threat to global public health is emerging.
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Editors’ note: These modellers predict that a wave of NNRTI- (non-nucleoside reverse transcriptase inhibitor) resistant strains will emerge over the next 5 years in San Francisco due to HIV transmission from untreated individuals. They also claim that if the reproduction number (the number of infections that one person transmits) of wild-type strains is reduced below one in resource-constrained settings (which would normally see an epidemic decline), self-sustaining epidemics of NNRTI-resistant strains could arise. Whether their model’s predictions are accurate or not remains to be seen but clearly increased investment in resistance monitoring around the world is warranted as we scale up to universal access to antiretroviral treatment for all.
Improved Virological Outcomes in British Columbia Concomitant with Decreasing Incidence of HIV Type 1 Drug Resistance Detection.
Gill V, Lima V, Wen Zhang, Wynhoven B, Yip B, Hogg R, Montaner J, and Harrigan R . Clinical Infectious Diseases. 2010. 50:98–105.
There have been limited studies evaluating temporal changes in the incidence of detection of drug resistance among human immunodeficiency virus type 1 (HIV-1) isolates and concomitant changes in plasma HIV load for treated individuals in a population-wide setting. Longitudinal plasma viral load and genotypic resistance data were obtained from patients receiving antiretroviral therapy from the British Columbia Drug Treatment Program from July 1996 through December 2008. A total of 24,652 resistance tests were available from 5422 individuals. The incidence of successful plasma viral load suppression and of resistance to each of 3 antiretroviral categories (nucleoside/nucleotide reversetranscriptase inhibitors, nonnucleoside reverse transcriptase inhibitors, and protease inhibitors) was calculated for the population receiving therapy. There has been a drastic decrease in the incidence of new cases of HIV-1 drug resistance in individuals followed during 1996–2008. In 1997, the incidence rate of any newly detected resistance was 1.73 cases per 100 person-months of therapy, and by 2008, the incidence rate had decreased 112-fold, to 0.13 cases per 100 person-months of therapy. This decrease in the incidence of resistance has occurred at an exponential rate, with halftimes on the order of 2–3 years. Concomitantly, the proportion of individuals with plasma viral load suppression has increased linearly over time (from 64.7% with HIV RNA levels !50 copies/mL in 2000 to 87.0% in 2008; R2p0.97; P ! .001). The authors’ results suggest an increasing effectiveness of antiretroviral therapy at the populational level. The vast majority of treated patients in British Columbia now have either suppressed plasma viral load or drug-susceptible HIV-1, according to their most recent test results.
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